Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPH3AQ9Y2J0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 KRT18P38-201ENST00000449496 1282 ntBASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 SEC1P-202ENST00000473944 940 ntBASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.82■□□□□ 0.28
RPH3AQ9Y2J0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 SPDYE15P-201ENST00000424157 909 ntBASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.81■□□□□ 0.28
RPH3AQ9Y2J0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 ANO7L1-203ENST00000602586 1720 ntBASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 FAM8A6P-201ENST00000407496 1135 ntBASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 AC026396.1-201ENST00000419388 421 ntBASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 AC034232.1-201ENST00000506026 1064 ntBASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPH3AQ9Y2J0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms