Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 RN7SL606P-201ENST00000472779 293 ntBASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCKAP1Q9Y2A7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 AC087289.5-201ENST00000586076 3175 ntBASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 AC005332.7-201ENST00000614046 2005 ntBASIC18.35■□□□□ 0.53
NCKAP1Q9Y2A7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 AC004263.2-201ENST00000617183 678 ntBASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKAP1Q9Y2A7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCKAP1Q9Y2A7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCKAP1Q9Y2A7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCKAP1Q9Y2A7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCKAP1Q9Y2A7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.33■□□□□ 0.53
NCKAP1Q9Y2A7 AL049812.1-201ENST00000432563 2267 ntBASIC18.33■□□□□ 0.53
NCKAP1Q9Y2A7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCKAP1Q9Y2A7 AC246785.2-201ENST00000432512 513 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms