Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HHLA3Q9XRX5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HHLA3Q9XRX5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 FSCN1P1-201ENST00000568912 1481 ntBASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 AC012618.2-201ENST00000428058 849 ntBASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 AC011298.2-201ENST00000617989 482 ntBASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 RCC2P6-201ENST00000526625 1557 ntBASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HHLA3Q9XRX5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 ANO7L1-203ENST00000602586 1720 ntBASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 AC233702.5-201ENST00000584107 538 ntBASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 AL645608.8-201ENST00000606034 2086 ntBASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.44□□□□□ -0.26
HHLA3Q9XRX5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HHLA3Q9XRX5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms