Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 VPS28-216ENST00000533806 650 ntTSL 320■□□□□ 0.793e-6■■□□□ 12.6
DROSHAQ9NRR4 VPS28-214ENST00000531032 573 ntTSL 1 (best)17.88■□□□□ 0.453e-6■■□□□ 12.6
DROSHAQ9NRR4 VPS28-204ENST00000526054 892 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.113e-6■■□□□ 12.6
DROSHAQ9NRR4 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.029e-13■■□□□ 12.6
DROSHAQ9NRR4 WDR26-202ENST00000443112 1306 ntTSL 1 (best)11.1□□□□□ -0.639e-13■■□□□ 12.6
DROSHAQ9NRR4 AHNAK-203ENST00000525875 793 ntTSL 316.35■□□□□ 0.216e-8■■□□□ 12.6
DROSHAQ9NRR4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.566e-7■■□□□ 12.6
DROSHAQ9NRR4 HDGF-209ENST00000495212 744 ntTSL 331.03■■■□□ 2.562e-6■■□□□ 12.6
DROSHAQ9NRR4 HDGF-205ENST00000469145 844 ntTSL 230.65■■■□□ 2.52e-6■■□□□ 12.6
DROSHAQ9NRR4 HDGF-202ENST00000368206 960 ntTSL 5 BASIC20.13■□□□□ 0.812e-6■■□□□ 12.6
DROSHAQ9NRR4 HDGF-206ENST00000471377 592 ntTSL 313.92□□□□□ -0.182e-6■■□□□ 12.6
DROSHAQ9NRR4 HDGF-208ENST00000482651 966 ntTSL 313.38□□□□□ -0.272e-6■■□□□ 12.6
DROSHAQ9NRR4 CD63-204ENST00000546939 779 ntTSL 3 BASIC26.67■■□□□ 1.861e-8■■□□□ 12.6
DROSHAQ9NRR4 CD63-210ENST00000550776 870 ntTSL 5 BASIC25.91■■□□□ 1.741e-8■■□□□ 12.6
DROSHAQ9NRR4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 21e-7■■□□□ 12.6
DROSHAQ9NRR4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.71e-7■■□□□ 12.6
DROSHAQ9NRR4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.531e-7■■□□□ 12.6
DROSHAQ9NRR4 TRA2A-203ENST00000448549 582 ntTSL 424.48■■□□□ 1.511e-7■■□□□ 12.6
DROSHAQ9NRR4 TRA2A-208ENST00000490942 862 ntTSL 1 (best)24.35■■□□□ 1.491e-7■■□□□ 12.6
DROSHAQ9NRR4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.191e-7■■□□□ 12.6
DROSHAQ9NRR4 TRA2A-209ENST00000494255 1653 ntTSL 1 (best)19.06■□□□□ 0.641e-7■■□□□ 12.6
DROSHAQ9NRR4 FAM76B-211ENST00000543641 1379 ntTSL 1 (best)41.15■■■■■ 4.184e-7■■□□□ 12.6
DROSHAQ9NRR4 FAM76B-212ENST00000545654 2001 ntTSL 237.39■■■■□ 3.584e-7■■□□□ 12.6
DROSHAQ9NRR4 FAM76B-207ENST00000538316 585 ntTSL 535.44■■■■□ 3.264e-7■■□□□ 12.6
DROSHAQ9NRR4 FAM76B-210ENST00000542135 610 ntTSL 225.48■■□□□ 1.674e-7■■□□□ 12.6
DROSHAQ9NRR4 FAM76B-208ENST00000540054 730 ntTSL 222.12■■□□□ 1.134e-7■■□□□ 12.6
DROSHAQ9NRR4 FAM76B-202ENST00000398187 3823 ntTSL 1 (best)22.01■■□□□ 1.114e-7■■□□□ 12.6
DROSHAQ9NRR4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.024e-7■■□□□ 12.6
DROSHAQ9NRR4 SMG1P3-201ENST00000435197 416 ntTSL 329.06■■■□□ 2.241e-6■■□□□ 12.6
DROSHAQ9NRR4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.681e-10■■□□□ 12.6
DROSHAQ9NRR4 CLN6-224ENST00000638076 2323 ntTSL 1 (best)31.65■■■□□ 2.661e-10■■□□□ 12.6
DROSHAQ9NRR4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC30.79■■■□□ 2.521e-10■■□□□ 12.6
DROSHAQ9NRR4 HSPE1-205ENST00000465573 639 ntTSL 229.17■■■□□ 2.261e-10■■□□□ 12.6
DROSHAQ9NRR4 TLE3-217ENST00000559574 325 ntTSL 528.76■■■□□ 2.21e-10■■□□□ 12.6
DROSHAQ9NRR4 HSPE1-207ENST00000495200 537 ntTSL 328.08■■■□□ 2.091e-10■■□□□ 12.6
DROSHAQ9NRR4 MXD4-202ENST00000510822 561 ntTSL 325.72■■□□□ 1.714e-6■■□□□ 12.6
DROSHAQ9NRR4 CLN6-208ENST00000567060 945 ntTSL 225.64■■□□□ 1.691e-10■■□□□ 12.6
DROSHAQ9NRR4 AC107871.1-203ENST00000637054 3238 ntTSL 524.08■■□□□ 1.451e-10■■□□□ 12.6
DROSHAQ9NRR4 AC107871.1-201ENST00000637888 2941 ntTSL 524.03■■□□□ 1.441e-10■■□□□ 12.6
DROSHAQ9NRR4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.421e-10■■□□□ 12.6
DROSHAQ9NRR4 MXD4-205ENST00000515378 522 ntTSL 223.52■■□□□ 1.364e-6■■□□□ 12.6
DROSHAQ9NRR4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.351e-10■■□□□ 12.6
DROSHAQ9NRR4 CLN6-219ENST00000637329 1204 ntTSL 523.4■■□□□ 1.341e-10■■□□□ 12.6
DROSHAQ9NRR4 HSPE1-206ENST00000473395 569 ntTSL 221.67■■□□□ 1.061e-10■■□□□ 12.6
DROSHAQ9NRR4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.741e-10■■□□□ 12.6
DROSHAQ9NRR4 NDUFA5-205ENST00000467117 687 ntTSL 219.5■□□□□ 0.714e-6■■□□□ 12.6
DROSHAQ9NRR4 NDUFA5-209ENST00000491033 662 ntTSL 219.5■□□□□ 0.714e-6■■□□□ 12.6
DROSHAQ9NRR4 NDUFA5-211ENST00000611607 1504 ntTSL 2 BASIC18.68■□□□□ 0.584e-6■■□□□ 12.6
DROSHAQ9NRR4 NDUFA5-212ENST00000618945 1432 ntTSL 2 BASIC18.58■□□□□ 0.574e-6■■□□□ 12.6
DROSHAQ9NRR4 NDUFA5-201ENST00000355749 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.484e-6■■□□□ 12.6
DROSHAQ9NRR4 CLN6-217ENST00000636964 3335 ntTSL 216.84■□□□□ 0.291e-10■■□□□ 12.6
DROSHAQ9NRR4 NDUFA5-204ENST00000466896 778 ntTSL 315.86■□□□□ 0.134e-6■■□□□ 12.6
DROSHAQ9NRR4 NDUFA5-208ENST00000490618 2802 ntTSL 212.94□□□□□ -0.344e-6■■□□□ 12.6
DROSHAQ9NRR4 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC11.7□□□□□ -0.541e-10■■□□□ 12.6
DROSHAQ9NRR4 NDUFA5-210ENST00000492549 571 ntTSL 29.63□□□□□ -0.874e-6■■□□□ 12.6
DROSHAQ9NRR4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.68□□□□□ -1.184e-6■■□□□ 12.6
DROSHAQ9NRR4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.561e-10■■□□□ 12.6
DROSHAQ9NRR4 HSPE1-204ENST00000463841 700 ntTSL 24.54□□□□□ -1.681e-10■■□□□ 12.6
DROSHAQ9NRR4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC40.38■■■■■ 4.063e-8■■□□□ 12.6
DROSHAQ9NRR4 UBE2S-202ENST00000587845 743 ntTSL 236.34■■■■□ 3.413e-8■■□□□ 12.6
DROSHAQ9NRR4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.673e-8■■□□□ 12.6
DROSHAQ9NRR4 TRMT2A-209ENST00000463710 757 ntTSL 326.53■■□□□ 1.842e-11■■□□□ 12.6
DROSHAQ9NRR4 TRMT2A-212ENST00000471040 848 ntTSL 326.53■■□□□ 1.842e-11■■□□□ 12.6
DROSHAQ9NRR4 TRMT2A-217ENST00000488335 379 ntTSL 325.71■■□□□ 1.712e-11■■□□□ 12.6
DROSHAQ9NRR4 EIF5A-210ENST00000575001 609 ntTSL 236.8■■■■□ 3.487e-7■■□□□ 12.6
DROSHAQ9NRR4 EIF5A-203ENST00000355068 923 ntTSL 210.41□□□□□ -0.747e-7■■□□□ 12.6
DROSHAQ9NRR4 GUK1-214ENST00000460224 639 ntTSL 523.91■■□□□ 1.421e-7■■□□□ 12.6
DROSHAQ9NRR4 GUK1-211ENST00000412265 1012 ntTSL 521.09■□□□□ 0.971e-7■■□□□ 12.6
DROSHAQ9NRR4 GUK1-221ENST00000472939 314 ntTSL 320.77■□□□□ 0.921e-7■■□□□ 12.6
DROSHAQ9NRR4 GUK1-229ENST00000485733 345 ntTSL 319.44■□□□□ 0.71e-7■■□□□ 12.6
DROSHAQ9NRR4 ARF1-211ENST00000490705 881 ntTSL 320.48■□□□□ 0.873e-23■■□□□ 12.6
DROSHAQ9NRR4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.723e-8■■□□□ 12.6
DROSHAQ9NRR4 DDAH2-220ENST00000488119 1121 ntTSL 234.45■■■■□ 3.113e-8■■□□□ 12.6
DROSHAQ9NRR4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.313e-8■■□□□ 12.6
DROSHAQ9NRR4 DDAH2-218ENST00000480913 937 ntTSL 529.27■■■□□ 2.283e-8■■□□□ 12.6
DROSHAQ9NRR4 DDAH2-219ENST00000483792 898 ntTSL 519.23■□□□□ 0.673e-8■■□□□ 12.6
DROSHAQ9NRR4 FAM78A-204ENST00000464831 792 ntTSL 222.83■■□□□ 1.252e-9■■□□□ 12.6
DROSHAQ9NRR4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC38.36■■■■□ 3.733e-7■■□□□ 12.6
DROSHAQ9NRR4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC35.42■■■■□ 3.263e-7■■□□□ 12.6
DROSHAQ9NRR4 HNRNPUL1-219ENST00000601336 754 ntTSL 229.62■■■□□ 2.333e-7■■□□□ 12.6
DROSHAQ9NRR4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC24.69■■□□□ 1.543e-7■■□□□ 12.6
DROSHAQ9NRR4 HNRNPUL1-214ENST00000599719 1473 ntTSL 1 (best)22.98■■□□□ 1.273e-7■■□□□ 12.6
DROSHAQ9NRR4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.143e-7■■□□□ 12.6
DROSHAQ9NRR4 HNRNPUL1-208ENST00000595196 3043 ntTSL 1 (best)21.49■■□□□ 1.033e-7■■□□□ 12.6
DROSHAQ9NRR4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC20.22■□□□□ 0.833e-7■■□□□ 12.6
DROSHAQ9NRR4 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.653e-7■■□□□ 12.6
DROSHAQ9NRR4 HNRNPUL1-218ENST00000601309 672 ntTSL 518.82■□□□□ 0.63e-7■■□□□ 12.6
DROSHAQ9NRR4 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC18.81■□□□□ 0.63e-7■■□□□ 12.6
DROSHAQ9NRR4 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC16.68■□□□□ 0.263e-7■■□□□ 12.6
DROSHAQ9NRR4 HNRNPUL1-211ENST00000597725 573 ntTSL 415.85■□□□□ 0.133e-7■■□□□ 12.6
DROSHAQ9NRR4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.381e-6■■□□□ 12.6
DROSHAQ9NRR4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.894e-7■■□□□ 12.6
DROSHAQ9NRR4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC31.38■■■□□ 2.613e-8■■□□□ 12.6
DROSHAQ9NRR4 STRBP-203ENST00000407982 2751 ntTSL 1 (best)28.24■■■□□ 2.113e-8■■□□□ 12.6
DROSHAQ9NRR4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.833e-8■■□□□ 12.6
DROSHAQ9NRR4 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC18.75■□□□□ 0.595e-8■■□□□ 12.6
DROSHAQ9NRR4 NBR2-203ENST00000467245 1158 ntTSL 2 BASIC14.29□□□□□ -0.125e-8■■□□□ 12.6
DROSHAQ9NRR4 NBR2-201ENST00000356906 978 ntTSL 1 (best)11.39□□□□□ -0.595e-8■■□□□ 12.6
DROSHAQ9NRR4 DCXR-217ENST00000582613 617 ntTSL 240.13■■■■■ 4.024e-6■■□□□ 12.6
DROSHAQ9NRR4 DCXR-220ENST00000585085 927 ntTSL 536.91■■■■□ 3.54e-6■■□□□ 12.6
Retrieved 100 of 16,331 protein–RNA pairs in 102.6 ms