Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 PCED1CP-201ENST00000419887 785 ntBASIC17.28■□□□□ 0.36
KLHL1Q9NR64 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.28■□□□□ 0.36
KLHL1Q9NR64 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 NEK4P2-201ENST00000580004 1012 ntBASIC17.28■□□□□ 0.36
KLHL1Q9NR64 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 AL138781.2-201ENST00000617896 1843 ntBASIC17.28■□□□□ 0.36
KLHL1Q9NR64 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHL1Q9NR64 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 CROCCP3-202ENST00000420820 1947 ntBASIC17.27■□□□□ 0.36
KLHL1Q9NR64 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.27■□□□□ 0.36
KLHL1Q9NR64 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL1Q9NR64 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KLHL1Q9NR64 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
KLHL1Q9NR64 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KLHL1Q9NR64 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KLHL1Q9NR64 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
KLHL1Q9NR64 AC036111.1-201ENST00000533973 1582 ntBASIC17.27■□□□□ 0.35
KLHL1Q9NR64 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.27■□□□□ 0.35
KLHL1Q9NR64 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 AC112907.2-201ENST00000448639 330 ntBASIC17.26■□□□□ 0.35
KLHL1Q9NR64 FAM86EP-206ENST00000510506 987 ntBASIC17.26■□□□□ 0.35
KLHL1Q9NR64 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 AL121956.5-201ENST00000625261 221 ntBASIC17.26■□□□□ 0.35
KLHL1Q9NR64 AP000550.4-202ENST00000639755 178 ntBASIC17.26■□□□□ 0.35
KLHL1Q9NR64 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 IRX1P1-201ENST00000438849 1838 ntBASIC17.26■□□□□ 0.35
KLHL1Q9NR64 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL1Q9NR64 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms