Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 Z98044.1-201ENST00000632503 1764 ntBASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 AL109659.2-201ENST00000606809 1674 ntBASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 AC104076.2-201ENST00000448912 469 ntBASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 MIR3180-5-201ENST00000583743 153 ntBASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NECTIN3Q9NQS3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NECTIN3Q9NQS3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NECTIN3Q9NQS3 AC093525.10-201ENST00000625130 1569 ntBASIC17.58■□□□□ 0.41
NECTIN3Q9NQS3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.58■□□□□ 0.41
NECTIN3Q9NQS3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
NECTIN3Q9NQS3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.58■□□□□ 0.41
NECTIN3Q9NQS3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 AC009947.2-201ENST00000444014 672 ntBASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 WWOX-216ENST00000569818 525 ntBASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 AC006011.2-201ENST00000621313 1158 ntBASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.58■□□□□ 0.4
NECTIN3Q9NQS3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 BX664615.1-201ENST00000443558 458 ntBASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NECTIN3Q9NQS3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms