Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
SP110Q9HB58 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.79■□□□□ 0.6
SP110Q9HB58 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.79■□□□□ 0.6
SP110Q9HB58 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SP110Q9HB58 SPDYE15P-201ENST00000424157 909 ntBASIC18.79■□□□□ 0.6
SP110Q9HB58 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.79■□□□□ 0.6
SP110Q9HB58 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.79■□□□□ 0.6
SP110Q9HB58 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.79■□□□□ 0.6
SP110Q9HB58 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.79■□□□□ 0.6
SP110Q9HB58 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SP110Q9HB58 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
SP110Q9HB58 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.79■□□□□ 0.6
SP110Q9HB58 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.79■□□□□ 0.6
SP110Q9HB58 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SP110Q9HB58 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP110Q9HB58 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
SP110Q9HB58 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.78■□□□□ 0.6
SP110Q9HB58 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.78■□□□□ 0.6
SP110Q9HB58 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SP110Q9HB58 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
SP110Q9HB58 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.78■□□□□ 0.6
SP110Q9HB58 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SP110Q9HB58 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 AC009113.1-201ENST00000570267 2443 ntBASIC18.78■□□□□ 0.6
SP110Q9HB58 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 STARP1-201ENST00000397973 869 ntBASIC18.78■□□□□ 0.6
SP110Q9HB58 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 AC063952.2-201ENST00000498792 1227 ntBASIC18.78■□□□□ 0.6
SP110Q9HB58 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SP110Q9HB58 AC022616.7-201ENST00000525383 220 ntBASIC18.78■□□□□ 0.6
SP110Q9HB58 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 LINC01238-205ENST00000567549 1107 ntBASIC18.78■□□□□ 0.6
SP110Q9HB58 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SP110Q9HB58 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SP110Q9HB58 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.78■□□□□ 0.6
SP110Q9HB58 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SP110Q9HB58 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.78■□□□□ 0.6
SP110Q9HB58 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.78■□□□□ 0.6
SP110Q9HB58 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.78■□□□□ 0.6
SP110Q9HB58 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
SP110Q9HB58 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SP110Q9HB58 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.78■□□□□ 0.6
SP110Q9HB58 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP110Q9HB58 SDHAP2-201ENST00000455183 2001 ntBASIC18.78■□□□□ 0.6
SP110Q9HB58 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP110Q9HB58 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP110Q9HB58 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP110Q9HB58 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP110Q9HB58 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP110Q9HB58 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.77■□□□□ 0.6
SP110Q9HB58 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
SP110Q9HB58 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.77■□□□□ 0.6
SP110Q9HB58 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.77■□□□□ 0.6
SP110Q9HB58 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP110Q9HB58 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP110Q9HB58 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SP110Q9HB58 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.77■□□□□ 0.6
SP110Q9HB58 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP110Q9HB58 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SP110Q9HB58 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP110Q9HB58 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.77■□□□□ 0.6
SP110Q9HB58 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.77■□□□□ 0.59
SP110Q9HB58 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SP110Q9HB58 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SP110Q9HB58 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.77■□□□□ 0.59
SP110Q9HB58 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.77■□□□□ 0.59
SP110Q9HB58 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SP110Q9HB58 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SP110Q9HB58 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SP110Q9HB58 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.76■□□□□ 0.59
SP110Q9HB58 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.76■□□□□ 0.59
SP110Q9HB58 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SP110Q9HB58 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.76■□□□□ 0.59
SP110Q9HB58 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SP110Q9HB58 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SP110Q9HB58 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SP110Q9HB58 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms