Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 UNC93B7-201ENST00000509439 705 ntBASIC21.35■■□□□ 1.01
SH2D4AQ9H788 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 AC099336.1-202ENST00000602961 463 ntBASIC21.35■■□□□ 1.01
SH2D4AQ9H788 AL732292.2-201ENST00000609649 430 ntBASIC21.35■■□□□ 1.01
SH2D4AQ9H788 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SH2D4AQ9H788 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 AC138894.3-201ENST00000603787 634 ntBASIC21.34■■□□□ 1.01
SH2D4AQ9H788 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.34■■□□□ 1.01
SH2D4AQ9H788 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 IGHV3-47-201ENST00000425060 335 ntBASIC21.33■■□□□ 1.01
SH2D4AQ9H788 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.33■■□□□ 1.01
SH2D4AQ9H788 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SH2D4AQ9H788 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
SH2D4AQ9H788 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SH2D4AQ9H788 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.33■■□□□ 1
SH2D4AQ9H788 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
SH2D4AQ9H788 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SH2D4AQ9H788 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
SH2D4AQ9H788 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.32■■□□□ 1
SH2D4AQ9H788 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4AQ9H788 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4AQ9H788 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4AQ9H788 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH2D4AQ9H788 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH2D4AQ9H788 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.32■■□□□ 1
SH2D4AQ9H788 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.32■■□□□ 1
SH2D4AQ9H788 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.32■■□□□ 1
SH2D4AQ9H788 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.32■■□□□ 1
SH2D4AQ9H788 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.32■■□□□ 1
SH2D4AQ9H788 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH2D4AQ9H788 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH2D4AQ9H788 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4AQ9H788 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
SH2D4AQ9H788 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4AQ9H788 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.32■■□□□ 1
SH2D4AQ9H788 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4AQ9H788 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms