Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 HOMER2P1-201ENST00000455653 964 ntBASIC17.02■□□□□ 0.32
UBQLN3Q9H347 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 AC140113.3-201ENST00000605663 199 ntBASIC17.02■□□□□ 0.32
UBQLN3Q9H347 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.02■□□□□ 0.32
UBQLN3Q9H347 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.02■□□□□ 0.31
UBQLN3Q9H347 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
UBQLN3Q9H347 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBQLN3Q9H347 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
UBQLN3Q9H347 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
UBQLN3Q9H347 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 AC008556.1-201ENST00000610908 2040 ntBASIC17.01■□□□□ 0.31
UBQLN3Q9H347 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN3Q9H347 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
UBQLN3Q9H347 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17■□□□□ 0.31
UBQLN3Q9H347 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17■□□□□ 0.31
UBQLN3Q9H347 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17■□□□□ 0.31
UBQLN3Q9H347 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17■□□□□ 0.31
UBQLN3Q9H347 SAPCD2P2-201ENST00000431719 1174 ntBASIC17■□□□□ 0.31
UBQLN3Q9H347 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 GCSHP2-201ENST00000560971 527 ntBASIC17■□□□□ 0.31
UBQLN3Q9H347 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17■□□□□ 0.31
UBQLN3Q9H347 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17■□□□□ 0.31
UBQLN3Q9H347 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17■□□□□ 0.31
UBQLN3Q9H347 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17■□□□□ 0.31
UBQLN3Q9H347 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
UBQLN3Q9H347 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17■□□□□ 0.31
UBQLN3Q9H347 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 NFYC-AS1-201ENST00000606277 1687 ntBASIC17■□□□□ 0.31
UBQLN3Q9H347 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN3Q9H347 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 ARMC10P1-201ENST00000313754 855 ntBASIC16.99■□□□□ 0.31
UBQLN3Q9H347 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 AC092647.4-201ENST00000457211 535 ntBASIC16.99■□□□□ 0.31
UBQLN3Q9H347 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.99■□□□□ 0.31
UBQLN3Q9H347 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms