Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 RCC2P3-201ENST00000418112 1537 ntBASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 AC068587.9-201ENST00000641814 219 ntBASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MS4A6AQ9H2W1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 PKD1P1-201ENST00000458669 6805 ntBASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 AL031598.1-201ENST00000561511 1773 ntBASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 SLC25A1P2-201ENST00000430693 912 ntBASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 TSPY15P-201ENST00000457163 923 ntBASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 C2orf69P3-201ENST00000565542 1120 ntBASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.15□□□□□ -0.14
MS4A6AQ9H2W1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 AC099398.1-201ENST00000567919 2776 ntBASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 CCR12P-201ENST00000446203 998 ntBASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 AC008622.2-201ENST00000617006 1229 ntBASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MS4A6AQ9H2W1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms