Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
VPS11Q9H270 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
VPS11Q9H270 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.48■□□□□ 0.55
VPS11Q9H270 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
VPS11Q9H270 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.48■□□□□ 0.55
VPS11Q9H270 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.48■□□□□ 0.55
VPS11Q9H270 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.48■□□□□ 0.55
VPS11Q9H270 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VPS11Q9H270 CKBP1-201ENST00000565489 1086 ntBASIC18.48■□□□□ 0.55
VPS11Q9H270 AL031985.4-201ENST00000642138 673 ntBASIC18.48■□□□□ 0.55
VPS11Q9H270 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
VPS11Q9H270 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
VPS11Q9H270 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.48■□□□□ 0.55
VPS11Q9H270 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
VPS11Q9H270 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS11Q9H270 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 REXO1L9P-201ENST00000604264 2108 ntBASIC18.47■□□□□ 0.55
VPS11Q9H270 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 AC012317.2-201ENST00000623305 2251 ntBASIC18.47■□□□□ 0.55
VPS11Q9H270 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VPS11Q9H270 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.47■□□□□ 0.55
VPS11Q9H270 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.47■□□□□ 0.55
VPS11Q9H270 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.47■□□□□ 0.55
VPS11Q9H270 AL353807.1-201ENST00000427475 662 ntBASIC18.47■□□□□ 0.55
VPS11Q9H270 FAM207BP-201ENST00000447172 505 ntBASIC18.47■□□□□ 0.55
VPS11Q9H270 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.47■□□□□ 0.55
VPS11Q9H270 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.47■□□□□ 0.55
VPS11Q9H270 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.47■□□□□ 0.55
VPS11Q9H270 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.47■□□□□ 0.55
VPS11Q9H270 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
VPS11Q9H270 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VPS11Q9H270 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.47■□□□□ 0.55
VPS11Q9H270 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS11Q9H270 MYLKP1-201ENST00000509077 1580 ntBASIC18.47■□□□□ 0.55
VPS11Q9H270 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VPS11Q9H270 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VPS11Q9H270 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.46■□□□□ 0.55
VPS11Q9H270 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS11Q9H270 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS11Q9H270 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.46■□□□□ 0.55
VPS11Q9H270 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
VPS11Q9H270 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
VPS11Q9H270 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS11Q9H270 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS11Q9H270 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS11Q9H270 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS11Q9H270 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.46■□□□□ 0.55
VPS11Q9H270 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.46■□□□□ 0.55
VPS11Q9H270 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.46■□□□□ 0.55
VPS11Q9H270 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.46■□□□□ 0.55
VPS11Q9H270 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.46■□□□□ 0.55
VPS11Q9H270 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
VPS11Q9H270 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS11Q9H270 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS11Q9H270 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
VPS11Q9H270 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.46■□□□□ 0.54
VPS11Q9H270 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
VPS11Q9H270 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
VPS11Q9H270 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.45■□□□□ 0.54
VPS11Q9H270 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
VPS11Q9H270 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
VPS11Q9H270 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
VPS11Q9H270 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VPS11Q9H270 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms