Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 CHML-204ENST00000638121 920 ntTSL 2 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 AP006587.3-201ENST00000525742 1516 ntBASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
CYSTM1Q9H1C7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 SETD8P1-201ENST00000623146 1180 ntBASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CYSTM1Q9H1C7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CYSTM1Q9H1C7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC10.61□□□□□ -0.71
CYSTM1Q9H1C7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CYSTM1Q9H1C7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC10.61□□□□□ -0.71
CYSTM1Q9H1C7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CYSTM1Q9H1C7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CYSTM1Q9H1C7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
CYSTM1Q9H1C7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CYSTM1Q9H1C7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CYSTM1Q9H1C7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CYSTM1Q9H1C7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms