Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 MIR4651-201ENST00000582622 73 ntBASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 AC006058.3-201ENST00000606217 1069 ntBASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 AC012317.2-201ENST00000623305 2251 ntBASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHACTR1Q9C0D0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHACTR1Q9C0D0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 MFAP1P1-201ENST00000442257 1255 ntBASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 AC116562.2-201ENST00000507042 360 ntBASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHACTR1Q9C0D0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PHACTR1Q9C0D0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHACTR1Q9C0D0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHACTR1Q9C0D0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHACTR1Q9C0D0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms