Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL391807.1-203ENST00000604392 2365 ntBASIC22.27■■□□□ 1.16
RPAP1Q9BWH6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.27■■□□□ 1.16
RPAP1Q9BWH6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RPAP1Q9BWH6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
RPAP1Q9BWH6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RPAP1Q9BWH6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RPAP1Q9BWH6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
RPAP1Q9BWH6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.27■■□□□ 1.15
RPAP1Q9BWH6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
RPAP1Q9BWH6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 AP002414.4-201ENST00000589764 1148 ntBASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 AC126763.1-201ENST00000552015 2118 ntBASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 AL357033.4-201ENST00000617703 1807 ntBASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 AC073592.3-201ENST00000625118 1834 ntBASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.26■■□□□ 1.15
RPAP1Q9BWH6 AL390961.4-201ENST00000623958 2535 ntBASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 RN7SL510P-201ENST00000581311 263 ntBASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 BICD1-207ENST00000551848 1962 ntBASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.25■■□□□ 1.15
RPAP1Q9BWH6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 AL354751.1-201ENST00000412768 1863 ntBASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 AC026471.1-201ENST00000564629 3026 ntBASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 AC104390.1-201ENST00000555663 520 ntBASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 MIR3180-4-201ENST00000582223 153 ntBASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPAP1Q9BWH6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms