Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 AC008403.3-201ENST00000598924 454 ntBASIC16.85■□□□□ 0.29
COPS4Q9BT78 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COPS4Q9BT78 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.85■□□□□ 0.29
COPS4Q9BT78 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.84■□□□□ 0.29
COPS4Q9BT78 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COPS4Q9BT78 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.84■□□□□ 0.29
COPS4Q9BT78 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.84■□□□□ 0.29
COPS4Q9BT78 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.84■□□□□ 0.29
COPS4Q9BT78 AC026366.1-201ENST00000488803 879 ntBASIC16.84■□□□□ 0.29
COPS4Q9BT78 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.84■□□□□ 0.29
COPS4Q9BT78 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
COPS4Q9BT78 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.84■□□□□ 0.29
COPS4Q9BT78 AC069544.1-201ENST00000609399 999 ntBASIC16.84■□□□□ 0.29
COPS4Q9BT78 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 AC068587.9-201ENST00000641814 219 ntBASIC16.84■□□□□ 0.29
COPS4Q9BT78 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.84■□□□□ 0.29
COPS4Q9BT78 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 FLJ13224-201ENST00000313737 1514 ntBASIC16.84■□□□□ 0.29
COPS4Q9BT78 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
COPS4Q9BT78 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS4Q9BT78 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
COPS4Q9BT78 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COPS4Q9BT78 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COPS4Q9BT78 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.83■□□□□ 0.28
COPS4Q9BT78 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.83■□□□□ 0.28
COPS4Q9BT78 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.83■□□□□ 0.28
COPS4Q9BT78 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.83■□□□□ 0.28
COPS4Q9BT78 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.83■□□□□ 0.28
COPS4Q9BT78 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.83■□□□□ 0.28
COPS4Q9BT78 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.83■□□□□ 0.28
COPS4Q9BT78 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.83■□□□□ 0.28
COPS4Q9BT78 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
COPS4Q9BT78 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.83■□□□□ 0.28
COPS4Q9BT78 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS4Q9BT78 TNRC18P3-201ENST00000441896 2691 ntBASIC16.83■□□□□ 0.28
COPS4Q9BT78 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
COPS4Q9BT78 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms