Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 AC008556.1-201ENST00000610908 2040 ntBASIC12.78□□□□□ -0.36
UPK3BQ9BT76 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK3BQ9BT76 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
UPK3BQ9BT76 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.77□□□□□ -0.36
UPK3BQ9BT76 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
UPK3BQ9BT76 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK3BQ9BT76 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK3BQ9BT76 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.77□□□□□ -0.36
UPK3BQ9BT76 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.77□□□□□ -0.36
UPK3BQ9BT76 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
UPK3BQ9BT76 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
UPK3BQ9BT76 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK3BQ9BT76 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 AC116562.4-201ENST00000641316 2276 ntBASIC12.77□□□□□ -0.37
UPK3BQ9BT76 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK3BQ9BT76 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 KRT18P23-201ENST00000435622 1283 ntBASIC12.76□□□□□ -0.37
UPK3BQ9BT76 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 AC112907.2-201ENST00000448639 330 ntBASIC12.76□□□□□ -0.37
UPK3BQ9BT76 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.76□□□□□ -0.37
UPK3BQ9BT76 RASA4DP-201ENST00000460726 1199 ntBASIC12.76□□□□□ -0.37
UPK3BQ9BT76 SEC1P-202ENST00000473944 940 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms