Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 KRT18P35-201ENST00000510488 1269 ntBASIC21.33■■□□□ 1.01
SDF4Q9BRK5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.33■■□□□ 1.01
SDF4Q9BRK5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.33■■□□□ 1.01
SDF4Q9BRK5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.33■■□□□ 1.01
SDF4Q9BRK5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.33■■□□□ 1.01
SDF4Q9BRK5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.33■■□□□ 1.01
SDF4Q9BRK5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SDF4Q9BRK5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.33■■□□□ 1.01
SDF4Q9BRK5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SDF4Q9BRK5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SDF4Q9BRK5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SDF4Q9BRK5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.32■■□□□ 1
SDF4Q9BRK5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 NOC2LP1-202ENST00000452600 2235 ntBASIC21.32■■□□□ 1
SDF4Q9BRK5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 AC073592.3-201ENST00000625118 1834 ntBASIC21.32■■□□□ 1
SDF4Q9BRK5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
SDF4Q9BRK5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
SDF4Q9BRK5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
SDF4Q9BRK5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.32■■□□□ 1
SDF4Q9BRK5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SDF4Q9BRK5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SDF4Q9BRK5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.32■■□□□ 1
SDF4Q9BRK5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.32■■□□□ 1
SDF4Q9BRK5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.32■■□□□ 1
SDF4Q9BRK5 MIR4674-201ENST00000582457 87 ntBASIC21.32■■□□□ 1
SDF4Q9BRK5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.32■■□□□ 1
SDF4Q9BRK5 AC008622.2-201ENST00000617006 1229 ntBASIC21.32■■□□□ 1
SDF4Q9BRK5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
SDF4Q9BRK5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.32■■□□□ 1
SDF4Q9BRK5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.32■■□□□ 1
SDF4Q9BRK5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SDF4Q9BRK5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SDF4Q9BRK5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SDF4Q9BRK5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.32■■□□□ 1
SDF4Q9BRK5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.31■■□□□ 1
SDF4Q9BRK5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SDF4Q9BRK5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.31■■□□□ 1
SDF4Q9BRK5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.31■■□□□ 1
SDF4Q9BRK5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.31■■□□□ 1
SDF4Q9BRK5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SDF4Q9BRK5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.31■■□□□ 1
SDF4Q9BRK5 ARMC10P1-201ENST00000313754 855 ntBASIC21.31■■□□□ 1
SDF4Q9BRK5 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.31■■□□□ 1
SDF4Q9BRK5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.31■■□□□ 1
SDF4Q9BRK5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.31■■□□□ 1
SDF4Q9BRK5 YBX1P2-201ENST00000489612 999 ntBASIC21.31■■□□□ 1
SDF4Q9BRK5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.31■■□□□ 1
SDF4Q9BRK5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.31■■□□□ 1
SDF4Q9BRK5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.31■■□□□ 1
SDF4Q9BRK5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SDF4Q9BRK5 AL031432.5-201ENST00000641059 760 ntBASIC21.31■■□□□ 1
SDF4Q9BRK5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.31■■□□□ 1
SDF4Q9BRK5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SDF4Q9BRK5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.31■■□□□ 1
SDF4Q9BRK5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SDF4Q9BRK5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SDF4Q9BRK5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SDF4Q9BRK5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.3■■□□□ 1
SDF4Q9BRK5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.3■■□□□ 1
SDF4Q9BRK5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SDF4Q9BRK5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SDF4Q9BRK5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SDF4Q9BRK5 KRT8P3-201ENST00000519669 1449 ntBASIC21.3■■□□□ 1
SDF4Q9BRK5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.3■■□□□ 1
SDF4Q9BRK5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.3■■□□□ 1
SDF4Q9BRK5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.3■■□□□ 1
SDF4Q9BRK5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
SDF4Q9BRK5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SDF4Q9BRK5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.3■■□□□ 1
SDF4Q9BRK5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.3■■□□□ 1
SDF4Q9BRK5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.3■■□□□ 1
SDF4Q9BRK5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SDF4Q9BRK5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SDF4Q9BRK5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SDF4Q9BRK5 RNF152P1-201ENST00000397754 604 ntBASIC21.3■■□□□ 1
SDF4Q9BRK5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SDF4Q9BRK5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.3■■□□□ 1
SDF4Q9BRK5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.3■■□□□ 1
SDF4Q9BRK5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.3■■□□□ 1
SDF4Q9BRK5 LINC01238-205ENST00000567549 1107 ntBASIC21.3■■□□□ 1
SDF4Q9BRK5 AC140113.3-201ENST00000605663 199 ntBASIC21.3■■□□□ 1
SDF4Q9BRK5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.3■■□□□ 1
SDF4Q9BRK5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms