Protein–RNA interactions for Protein: Q99720

SIGMAR1, Sigma non-opioid intracellular receptor 1, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1Q99720 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SIGMAR1Q99720 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SIGMAR1Q99720 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC12.3□□□□□ -0.44
SIGMAR1Q99720 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SIGMAR1Q99720 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.3□□□□□ -0.44
SIGMAR1Q99720 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 OR7E47P-201ENST00000546390 1422 ntBASIC12.29□□□□□ -0.44
SIGMAR1Q99720 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 AC103724.3-201ENST00000564481 992 ntBASIC12.29□□□□□ -0.44
SIGMAR1Q99720 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SIGMAR1Q99720 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 PRAL-201ENST00000624952 3286 ntBASIC12.28□□□□□ -0.44
SIGMAR1Q99720 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 AC079089.2-201ENST00000531211 1277 ntBASIC12.28□□□□□ -0.44
SIGMAR1Q99720 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 AL137784.3-201ENST00000623858 2288 ntBASIC12.28□□□□□ -0.44
SIGMAR1Q99720 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 AL161772.1-201ENST00000610494 4412 ntBASIC12.28□□□□□ -0.44
SIGMAR1Q99720 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SIGMAR1Q99720 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms