Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RNF25Q96BH1 AL691447.1-201ENST00000419456 387 ntBASIC19.31■□□□□ 0.68
RNF25Q96BH1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF25Q96BH1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF25Q96BH1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF25Q96BH1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF25Q96BH1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 TSPY7P-201ENST00000431358 1114 ntBASIC19.3■□□□□ 0.68
RNF25Q96BH1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 MIR4674-201ENST00000582457 87 ntBASIC19.3■□□□□ 0.68
RNF25Q96BH1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.3■□□□□ 0.68
RNF25Q96BH1 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF25Q96BH1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF25Q96BH1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 CA15P1-201ENST00000481698 905 ntBASIC19.29■□□□□ 0.68
RNF25Q96BH1 AC008550.1-201ENST00000511500 884 ntBASIC19.29■□□□□ 0.68
RNF25Q96BH1 KRT18P41-201ENST00000518924 1277 ntBASIC19.29■□□□□ 0.68
RNF25Q96BH1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF25Q96BH1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF25Q96BH1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF25Q96BH1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF25Q96BH1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF25Q96BH1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF25Q96BH1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF25Q96BH1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF25Q96BH1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
RNF25Q96BH1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF25Q96BH1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF25Q96BH1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms