Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPB3Q92617 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.51□□□□□ -0.09
NPIPB3Q92617 RPPH1-201ENST00000516869 333 ntBASIC14.51□□□□□ -0.09
NPIPB3Q92617 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.51□□□□□ -0.09
NPIPB3Q92617 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPB3Q92617 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPB3Q92617 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.51□□□□□ -0.09
NPIPB3Q92617 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPB3Q92617 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.51□□□□□ -0.09
NPIPB3Q92617 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPB3Q92617 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NPIPB3Q92617 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.51□□□□□ -0.09
NPIPB3Q92617 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.51□□□□□ -0.09
NPIPB3Q92617 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPB3Q92617 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPB3Q92617 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPB3Q92617 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPB3Q92617 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.51□□□□□ -0.09
NPIPB3Q92617 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NPIPB3Q92617 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPB3Q92617 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPB3Q92617 AC134043.2-201ENST00000624206 2238 ntBASIC14.5□□□□□ -0.09
NPIPB3Q92617 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NPIPB3Q92617 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPB3Q92617 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 KRT18P41-201ENST00000518924 1277 ntBASIC14.5□□□□□ -0.09
NPIPB3Q92617 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPB3Q92617 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPB3Q92617 RARRES2P10-201ENST00000564312 460 ntBASIC14.5□□□□□ -0.09
NPIPB3Q92617 AC008622.2-201ENST00000617006 1229 ntBASIC14.5□□□□□ -0.09
NPIPB3Q92617 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NPIPB3Q92617 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 FSCN1P1-201ENST00000568912 1481 ntBASIC14.5□□□□□ -0.09
NPIPB3Q92617 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPB3Q92617 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 GNAS-203ENST00000306120 1878 ntBASIC14.49□□□□□ -0.09
NPIPB3Q92617 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 MIR564-202ENST00000385049 94 ntBASIC14.49□□□□□ -0.09
NPIPB3Q92617 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 AP000692.2-201ENST00000608391 879 ntBASIC14.49□□□□□ -0.09
NPIPB3Q92617 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPB3Q92617 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPB3Q92617 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NPIPB3Q92617 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPB3Q92617 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPB3Q92617 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
NPIPB3Q92617 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NPIPB3Q92617 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPB3Q92617 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.48□□□□□ -0.09
NPIPB3Q92617 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPB3Q92617 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
NPIPB3Q92617 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPB3Q92617 AP000593.1-201ENST00000393668 712 ntBASIC14.48□□□□□ -0.09
NPIPB3Q92617 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.48□□□□□ -0.09
NPIPB3Q92617 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms