Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC008687.5-201ENST00000593746 558 ntBASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 LINC00602-201ENST00000629776 2065 ntBASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 AC126763.1-201ENST00000552015 2118 ntBASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 AL031008.1-201ENST00000619963 541 ntBASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF3Q8TEJ3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 NUS1P2-201ENST00000417358 873 ntBASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 FAAHP1-202ENST00000446499 1238 ntBASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 AC079781.3-201ENST00000449110 356 ntBASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 MINOS1P3-201ENST00000457048 203 ntBASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 AC068472.1-201ENST00000474589 881 ntBASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF3Q8TEJ3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 FDX1P1-201ENST00000449115 551 ntBASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 BNIP3P18-201ENST00000593976 575 ntBASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 AC104692.2-201ENST00000603054 253 ntBASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF3Q8TEJ3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.69■■□□□ 1.06
SH3RF3Q8TEJ3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.69■■□□□ 1.06
SH3RF3Q8TEJ3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF3Q8TEJ3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF3Q8TEJ3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF3Q8TEJ3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
SH3RF3Q8TEJ3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
SH3RF3Q8TEJ3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.69■■□□□ 1.06
SH3RF3Q8TEJ3 AC005336.2-201ENST00000593183 939 ntBASIC21.69■■□□□ 1.06
SH3RF3Q8TEJ3 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.69■■□□□ 1.06
SH3RF3Q8TEJ3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF3Q8TEJ3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF3Q8TEJ3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms