Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.25■□□□□ 0.67
SHKBP1Q8TBC3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SHKBP1Q8TBC3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHKBP1Q8TBC3 FDX1P1-201ENST00000449115 551 ntBASIC19.25■□□□□ 0.67
SHKBP1Q8TBC3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.25■□□□□ 0.67
SHKBP1Q8TBC3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHKBP1Q8TBC3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHKBP1Q8TBC3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.25■□□□□ 0.67
SHKBP1Q8TBC3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHKBP1Q8TBC3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHKBP1Q8TBC3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHKBP1Q8TBC3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 EMBP1-201ENST00000458200 901 ntBASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 AC104819.1-201ENST00000504587 486 ntBASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 AL121772.3-201ENST00000610840 674 ntBASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHKBP1Q8TBC3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 AC233702.3-201ENST00000578656 1387 ntBASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 KRT17P6-201ENST00000453795 1220 ntBASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 AC009065.1-201ENST00000564055 1225 ntBASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 AC091304.2-201ENST00000564639 760 ntBASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 AL592071.1-201ENST00000611956 408 ntBASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 AL049812.1-201ENST00000432563 2267 ntBASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 LINC00167-201ENST00000530583 1419 ntBASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHKBP1Q8TBC3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 KRT18P31-201ENST00000506277 1292 ntBASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 AC074051.2-201ENST00000565115 352 ntBASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHKBP1Q8TBC3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms