Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 KRT18P48-201ENST00000434763 852 ntBASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 AP003733.1-201ENST00000491725 852 ntBASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 AP000550.4-202ENST00000639755 178 ntBASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 RNF165-205ENST00000588679 2904 ntBASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01555Q8NAE3 AC135776.1-201ENST00000319817 2481 ntBASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 IGHGP-201ENST00000390555 1178 ntBASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01555Q8NAE3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 PHGDH-209ENST00000641074 1780 ntBASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 AC093677.2-201ENST00000600169 1863 ntBASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 AC005332.3-201ENST00000589904 676 ntBASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 AC011498.5-201ENST00000592027 486 ntBASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 AC091076.1-201ENST00000610741 619 ntBASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 Z83836.1-201ENST00000624605 1642 ntBASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01555Q8NAE3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 AL390719.2-201ENST00000606993 987 ntBASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms