Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC33Q8N5R6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 CLEC4GP1-201ENST00000596555 870 ntBASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC33Q8N5R6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC33Q8N5R6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC33Q8N5R6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms