Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 TSPY14P-201ENST00000303979 915 ntBASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 MIR564-202ENST00000385049 94 ntBASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 MCCD1P1-208ENST00000445732 328 ntBASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 C2orf69P3-201ENST00000565542 1120 ntBASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 AC010947.1-201ENST00000623454 693 ntBASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LRFN4Q6PJG9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 INGX-201ENST00000359239 846 ntBASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 AC007663.1-201ENST00000438948 1240 ntBASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 CCR12P-201ENST00000446203 998 ntBASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 AC116562.4-202ENST00000641738 218 ntBASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN4Q6PJG9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN4Q6PJG9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.52■□□□□ 0.23
LRFN4Q6PJG9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN4Q6PJG9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN4Q6PJG9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN4Q6PJG9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LRFN4Q6PJG9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN4Q6PJG9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN4Q6PJG9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN4Q6PJG9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LRFN4Q6PJG9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN4Q6PJG9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRFN4Q6PJG9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.52■□□□□ 0.23
LRFN4Q6PJG9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 AC011270.2-201ENST00000624293 2550 ntBASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 AC126763.1-201ENST00000552015 2118 ntBASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 EGLN1P1-201ENST00000531623 762 ntBASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 BICD1-207ENST00000551848 1962 ntBASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRFN4Q6PJG9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRFN4Q6PJG9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.5■□□□□ 0.23
LRFN4Q6PJG9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
LRFN4Q6PJG9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN4Q6PJG9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRFN4Q6PJG9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms