Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.14■□□□□ 0.66
FOXR1Q6PIV2 PTBP1P-201ENST00000554374 1601 ntBASIC19.14■□□□□ 0.66
FOXR1Q6PIV2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
FOXR1Q6PIV2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.14■□□□□ 0.66
FOXR1Q6PIV2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
FOXR1Q6PIV2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 KRT18P35-201ENST00000510488 1269 ntBASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 AL049597.2-201ENST00000565575 961 ntBASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 AL121906.2-201ENST00000621597 723 ntBASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXR1Q6PIV2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 AC073195.1-201ENST00000607241 877 ntBASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 AP000525.1-201ENST00000608286 694 ntBASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXR1Q6PIV2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 IRX1P1-201ENST00000438849 1838 ntBASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 MIR1238-201ENST00000408483 83 ntBASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 AC023632.3-201ENST00000521633 145 ntBASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
FOXR1Q6PIV2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 AL162741.1-201ENST00000565563 1558 ntBASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 UNC93B2-201ENST00000285383 730 ntBASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms