Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 KRT18P41-201ENST00000518924 1277 ntBASIC12.16□□□□□ -0.46
SYCNQ0VAF6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SYCNQ0VAF6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.15□□□□□ -0.46
SYCNQ0VAF6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 C2orf69P3-201ENST00000565542 1120 ntBASIC12.15□□□□□ -0.46
SYCNQ0VAF6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYCNQ0VAF6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
SYCNQ0VAF6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.47
SYCNQ0VAF6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.15□□□□□ -0.47
SYCNQ0VAF6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC12.15□□□□□ -0.47
SYCNQ0VAF6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SYCNQ0VAF6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 ABALON-201ENST00000629058 1903 ntBASIC12.14□□□□□ -0.47
SYCNQ0VAF6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 SNORA78-201ENST00000459373 127 ntBASIC12.14□□□□□ -0.47
SYCNQ0VAF6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 AC116562.4-202ENST00000641738 218 ntBASIC12.14□□□□□ -0.47
SYCNQ0VAF6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SYCNQ0VAF6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms