Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM11AP58511 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.94■□□□□ 0.3
SMIM11AP58511 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM11AP58511 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM11AP58511 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM11AP58511 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM11AP58511 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM11AP58511 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SMIM11AP58511 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM11AP58511 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM11AP58511 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM11AP58511 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM11AP58511 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM11AP58511 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM11AP58511 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SMIM11AP58511 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SMIM11AP58511 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SMIM11AP58511 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM11AP58511 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM11AP58511 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
SMIM11AP58511 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM11AP58511 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM11AP58511 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.93■□□□□ 0.3
SMIM11AP58511 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.93■□□□□ 0.3
SMIM11AP58511 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.93■□□□□ 0.3
SMIM11AP58511 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SMIM11AP58511 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM11AP58511 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM11AP58511 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.93■□□□□ 0.3
SMIM11AP58511 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.93■□□□□ 0.3
SMIM11AP58511 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
SMIM11AP58511 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SMIM11AP58511 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.93■□□□□ 0.3
SMIM11AP58511 MCCD1P1-208ENST00000445732 328 ntBASIC16.93■□□□□ 0.3
SMIM11AP58511 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM11AP58511 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.93■□□□□ 0.3
SMIM11AP58511 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SMIM11AP58511 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.93■□□□□ 0.3
SMIM11AP58511 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.93■□□□□ 0.3
SMIM11AP58511 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.93■□□□□ 0.3
SMIM11AP58511 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SMIM11AP58511 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.93■□□□□ 0.3
SMIM11AP58511 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.93■□□□□ 0.3
SMIM11AP58511 AC073195.1-201ENST00000607241 877 ntBASIC16.93■□□□□ 0.3
SMIM11AP58511 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM11AP58511 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM11AP58511 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SMIM11AP58511 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM11AP58511 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM11AP58511 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM11AP58511 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.93■□□□□ 0.3
SMIM11AP58511 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM11AP58511 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.93■□□□□ 0.3
SMIM11AP58511 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.93■□□□□ 0.3
SMIM11AP58511 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.92■□□□□ 0.3
SMIM11AP58511 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.92■□□□□ 0.3
SMIM11AP58511 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SMIM11AP58511 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.92■□□□□ 0.3
SMIM11AP58511 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SMIM11AP58511 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.92■□□□□ 0.3
SMIM11AP58511 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
SMIM11AP58511 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.92■□□□□ 0.3
SMIM11AP58511 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.92■□□□□ 0.3
SMIM11AP58511 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 MIR6786-201ENST00000616843 113 ntBASIC16.92■□□□□ 0.3
SMIM11AP58511 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
SMIM11AP58511 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.92■□□□□ 0.3
SMIM11AP58511 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.92■□□□□ 0.3
SMIM11AP58511 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMIM11AP58511 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SMIM11AP58511 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.92■□□□□ 0.3
SMIM11AP58511 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 OR6D1P-203ENST00000641209 4860 ntBASIC16.92■□□□□ 0.3
SMIM11AP58511 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.92■□□□□ 0.3
SMIM11AP58511 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM11AP58511 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SMIM11AP58511 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.91■□□□□ 0.3
SMIM11AP58511 AL096828.2-201ENST00000567259 1965 ntBASIC16.91■□□□□ 0.3
SMIM11AP58511 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.91■□□□□ 0.3
SMIM11AP58511 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 AC008040.2-201ENST00000461049 708 ntBASIC16.91■□□□□ 0.3
SMIM11AP58511 AC090192.1-201ENST00000517740 490 ntBASIC16.91■□□□□ 0.3
SMIM11AP58511 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.91■□□□□ 0.3
SMIM11AP58511 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.91■□□□□ 0.3
SMIM11AP58511 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SMIM11AP58511 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms