Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.66■□□□□ 0.26
CENPAP49450 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.66■□□□□ 0.26
CENPAP49450 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.66■□□□□ 0.26
CENPAP49450 AL499627.1-201ENST00000569373 2188 ntBASIC16.66■□□□□ 0.26
CENPAP49450 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CENPAP49450 ITM2C-210ENST00000620962 501 ntBASIC16.66■□□□□ 0.26
CENPAP49450 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.66■□□□□ 0.26
CENPAP49450 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.66■□□□□ 0.26
CENPAP49450 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.66■□□□□ 0.26
CENPAP49450 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CENPAP49450 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.66■□□□□ 0.26
CENPAP49450 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.66■□□□□ 0.26
CENPAP49450 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CENPAP49450 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.65■□□□□ 0.26
CENPAP49450 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CENPAP49450 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.65■□□□□ 0.26
CENPAP49450 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CENPAP49450 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CENPAP49450 KRT8P45-201ENST00000414328 1447 ntBASIC16.65■□□□□ 0.26
CENPAP49450 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.65■□□□□ 0.26
CENPAP49450 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.65■□□□□ 0.26
CENPAP49450 AC008040.2-201ENST00000461049 708 ntBASIC16.65■□□□□ 0.26
CENPAP49450 AC011506.1-201ENST00000474329 610 ntBASIC16.65■□□□□ 0.26
CENPAP49450 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.65■□□□□ 0.26
CENPAP49450 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.65■□□□□ 0.26
CENPAP49450 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CENPAP49450 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.65■□□□□ 0.26
CENPAP49450 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.65■□□□□ 0.26
CENPAP49450 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.65■□□□□ 0.26
CENPAP49450 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CENPAP49450 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.65■□□□□ 0.26
CENPAP49450 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CENPAP49450 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CENPAP49450 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.65■□□□□ 0.26
CENPAP49450 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.65■□□□□ 0.26
CENPAP49450 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.65■□□□□ 0.26
CENPAP49450 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPAP49450 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.65■□□□□ 0.26
CENPAP49450 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.64■□□□□ 0.26
CENPAP49450 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CENPAP49450 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CENPAP49450 ABALON-201ENST00000629058 1903 ntBASIC16.64■□□□□ 0.26
CENPAP49450 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CENPAP49450 FZD10-202ENST00000539839 3282 ntBASIC16.64■□□□□ 0.25
CENPAP49450 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CENPAP49450 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPAP49450 AL135905.2-201ENST00000584934 1404 ntBASIC16.64■□□□□ 0.25
CENPAP49450 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPAP49450 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CENPAP49450 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CENPAP49450 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.64■□□□□ 0.25
CENPAP49450 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPAP49450 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPAP49450 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CENPAP49450 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPAP49450 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CENPAP49450 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.64■□□□□ 0.25
CENPAP49450 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.64■□□□□ 0.25
CENPAP49450 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.64■□□□□ 0.25
CENPAP49450 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.64■□□□□ 0.25
CENPAP49450 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.64■□□□□ 0.25
CENPAP49450 AC130371.2-201ENST00000619443 611 ntBASIC16.64■□□□□ 0.25
CENPAP49450 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.64■□□□□ 0.25
CENPAP49450 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPAP49450 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CENPAP49450 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPAP49450 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CENPAP49450 RCC2P3-201ENST00000418112 1537 ntBASIC16.64■□□□□ 0.25
CENPAP49450 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CENPAP49450 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CENPAP49450 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPAP49450 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CENPAP49450 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPAP49450 AL139384.1-201ENST00000612143 3047 ntBASIC16.63■□□□□ 0.25
CENPAP49450 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPAP49450 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CENPAP49450 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPAP49450 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.63■□□□□ 0.25
CENPAP49450 B3GAT3P1-201ENST00000471720 806 ntBASIC16.63■□□□□ 0.25
CENPAP49450 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.63■□□□□ 0.25
CENPAP49450 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPAP49450 CKBP1-201ENST00000565489 1086 ntBASIC16.63■□□□□ 0.25
CENPAP49450 SLC25A1P4-201ENST00000567977 778 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms