Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16■□□□□ 0.15
GDNFP39905 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16■□□□□ 0.15
GDNFP39905 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16■□□□□ 0.15
GDNFP39905 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16■□□□□ 0.15
GDNFP39905 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDNFP39905 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDNFP39905 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDNFP39905 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16■□□□□ 0.15
GDNFP39905 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDNFP39905 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16■□□□□ 0.15
GDNFP39905 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDNFP39905 REXO1L9P-201ENST00000604264 2108 ntBASIC16■□□□□ 0.15
GDNFP39905 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16■□□□□ 0.15
GDNFP39905 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16■□□□□ 0.15
GDNFP39905 AD000864.1-201ENST00000624076 2295 ntBASIC15.99■□□□□ 0.15
GDNFP39905 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
GDNFP39905 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
GDNFP39905 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
GDNFP39905 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
GDNFP39905 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.99■□□□□ 0.15
GDNFP39905 AC239809.2-201ENST00000415381 517 ntBASIC15.99■□□□□ 0.15
GDNFP39905 TUBB8P6-201ENST00000436895 1288 ntBASIC15.99■□□□□ 0.15
GDNFP39905 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.99■□□□□ 0.15
GDNFP39905 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
GDNFP39905 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
GDNFP39905 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.99■□□□□ 0.15
GDNFP39905 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.99■□□□□ 0.15
GDNFP39905 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.99■□□□□ 0.15
GDNFP39905 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDNFP39905 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
GDNFP39905 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
GDNFP39905 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.98■□□□□ 0.15
GDNFP39905 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
GDNFP39905 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.98■□□□□ 0.15
GDNFP39905 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.98■□□□□ 0.15
GDNFP39905 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.98■□□□□ 0.15
GDNFP39905 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.98■□□□□ 0.15
GDNFP39905 TSPY21P-201ENST00000433481 731 ntBASIC15.98■□□□□ 0.15
GDNFP39905 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.98■□□□□ 0.15
GDNFP39905 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.98■□□□□ 0.15
GDNFP39905 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
GDNFP39905 AC124016.1-201ENST00000609552 612 ntBASIC15.98■□□□□ 0.15
GDNFP39905 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.98■□□□□ 0.15
GDNFP39905 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.98■□□□□ 0.15
GDNFP39905 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.98■□□□□ 0.15
GDNFP39905 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
GDNFP39905 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDNFP39905 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.97■□□□□ 0.15
GDNFP39905 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GDNFP39905 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms