Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 KRT8P50-201ENST00000562022 1438 ntBASIC15.96■□□□□ 0.15
ACKR3P25106 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ACKR3P25106 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.96■□□□□ 0.15
ACKR3P25106 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ACKR3P25106 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.96■□□□□ 0.15
ACKR3P25106 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
ACKR3P25106 MIR1238-201ENST00000408483 83 ntBASIC15.96■□□□□ 0.15
ACKR3P25106 SLC25A1P2-201ENST00000430693 912 ntBASIC15.96■□□□□ 0.15
ACKR3P25106 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.96■□□□□ 0.15
ACKR3P25106 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ACKR3P25106 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.96■□□□□ 0.15
ACKR3P25106 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.96■□□□□ 0.15
ACKR3P25106 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ACKR3P25106 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ACKR3P25106 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ACKR3P25106 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.96■□□□□ 0.15
ACKR3P25106 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ACKR3P25106 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.96■□□□□ 0.15
ACKR3P25106 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
ACKR3P25106 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ACKR3P25106 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
ACKR3P25106 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.96■□□□□ 0.14
ACKR3P25106 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ACKR3P25106 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ACKR3P25106 ESPNP-201ENST00000270691 2015 ntBASIC15.95■□□□□ 0.14
ACKR3P25106 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ACKR3P25106 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ACKR3P25106 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ACKR3P25106 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.95■□□□□ 0.14
ACKR3P25106 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ACKR3P25106 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ACKR3P25106 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.95■□□□□ 0.14
ACKR3P25106 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.95■□□□□ 0.14
ACKR3P25106 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ACKR3P25106 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ACKR3P25106 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.95■□□□□ 0.14
ACKR3P25106 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
ACKR3P25106 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.95■□□□□ 0.14
ACKR3P25106 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.95■□□□□ 0.14
ACKR3P25106 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.95■□□□□ 0.14
ACKR3P25106 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.95■□□□□ 0.14
ACKR3P25106 AL353719.1-201ENST00000566847 864 ntBASIC15.95■□□□□ 0.14
ACKR3P25106 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.95■□□□□ 0.14
ACKR3P25106 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ACKR3P25106 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.95■□□□□ 0.14
ACKR3P25106 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ACKR3P25106 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ACKR3P25106 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ACKR3P25106 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.95■□□□□ 0.14
ACKR3P25106 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ACKR3P25106 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
ACKR3P25106 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ACKR3P25106 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ACKR3P25106 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 AC092338.2-201ENST00000568827 1415 ntBASIC15.94■□□□□ 0.14
ACKR3P25106 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
ACKR3P25106 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
ACKR3P25106 HTR7P1-202ENST00000624664 4411 ntBASIC15.94■□□□□ 0.14
ACKR3P25106 AC106820.2-201ENST00000563775 3264 ntBASIC15.94■□□□□ 0.14
ACKR3P25106 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
ACKR3P25106 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 AP000593.1-201ENST00000393668 712 ntBASIC15.94■□□□□ 0.14
ACKR3P25106 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 TSPY15P-201ENST00000457163 923 ntBASIC15.94■□□□□ 0.14
ACKR3P25106 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.94■□□□□ 0.14
ACKR3P25106 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.94■□□□□ 0.14
ACKR3P25106 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.94■□□□□ 0.14
ACKR3P25106 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 AC093677.2-201ENST00000600169 1863 ntBASIC15.94■□□□□ 0.14
ACKR3P25106 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.94■□□□□ 0.14
ACKR3P25106 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ACKR3P25106 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ACKR3P25106 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.94■□□□□ 0.14
ACKR3P25106 KRT17P2-201ENST00000300992 1314 ntBASIC15.94■□□□□ 0.14
ACKR3P25106 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ACKR3P25106 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ACKR3P25106 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ACKR3P25106 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.93■□□□□ 0.14
ACKR3P25106 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ACKR3P25106 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.93■□□□□ 0.14
ACKR3P25106 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
ACKR3P25106 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.93■□□□□ 0.14
ACKR3P25106 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.93■□□□□ 0.14
ACKR3P25106 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ACKR3P25106 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ACKR3P25106 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ACKR3P25106 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
ACKR3P25106 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.93■□□□□ 0.14
ACKR3P25106 TSPY17P-201ENST00000450329 467 ntBASIC15.93■□□□□ 0.14
ACKR3P25106 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ACKR3P25106 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms