Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.46■□□□□ 0.55
VCLP18206 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCLP18206 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCLP18206 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
VCLP18206 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCLP18206 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.46■□□□□ 0.55
VCLP18206 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
VCLP18206 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
VCLP18206 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
VCLP18206 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
VCLP18206 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
VCLP18206 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.46■□□□□ 0.54
VCLP18206 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
VCLP18206 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
VCLP18206 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.46■□□□□ 0.54
VCLP18206 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.45■□□□□ 0.54
VCLP18206 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.45■□□□□ 0.54
VCLP18206 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.45■□□□□ 0.54
VCLP18206 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.45■□□□□ 0.54
VCLP18206 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
VCLP18206 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
VCLP18206 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
VCLP18206 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.45■□□□□ 0.54
VCLP18206 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.45■□□□□ 0.54
VCLP18206 NEK4P2-201ENST00000580004 1012 ntBASIC18.45■□□□□ 0.54
VCLP18206 MIR3180-5-201ENST00000583743 153 ntBASIC18.45■□□□□ 0.54
VCLP18206 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.45■□□□□ 0.54
VCLP18206 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.45■□□□□ 0.54
VCLP18206 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.45■□□□□ 0.54
VCLP18206 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 AL138966.2-201ENST00000621997 464 ntBASIC18.45■□□□□ 0.54
VCLP18206 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
VCLP18206 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.45■□□□□ 0.54
VCLP18206 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.45■□□□□ 0.54
VCLP18206 AC139713.2-201ENST00000641328 2723 ntBASIC18.45■□□□□ 0.54
VCLP18206 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
VCLP18206 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.45■□□□□ 0.54
VCLP18206 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
VCLP18206 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCLP18206 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCLP18206 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
VCLP18206 RCC2P3-201ENST00000418112 1537 ntBASIC18.44■□□□□ 0.54
VCLP18206 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCLP18206 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCLP18206 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCLP18206 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VCLP18206 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.44■□□□□ 0.54
VCLP18206 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCLP18206 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCLP18206 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VCLP18206 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.44■□□□□ 0.54
VCLP18206 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCLP18206 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.44■□□□□ 0.54
VCLP18206 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
VCLP18206 COX11P1-201ENST00000489116 835 ntBASIC18.44■□□□□ 0.54
VCLP18206 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.44■□□□□ 0.54
VCLP18206 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
VCLP18206 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.44■□□□□ 0.54
VCLP18206 WWOX-216ENST00000569818 525 ntBASIC18.44■□□□□ 0.54
VCLP18206 MIR4674-201ENST00000582457 87 ntBASIC18.44■□□□□ 0.54
VCLP18206 AC140113.3-201ENST00000605663 199 ntBASIC18.44■□□□□ 0.54
VCLP18206 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.44■□□□□ 0.54
VCLP18206 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VCLP18206 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.44■□□□□ 0.54
VCLP18206 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
VCLP18206 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.44■□□□□ 0.54
VCLP18206 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCLP18206 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VCLP18206 AL109659.2-201ENST00000606809 1674 ntBASIC18.44■□□□□ 0.54
VCLP18206 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
VCLP18206 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
VCLP18206 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
VCLP18206 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VCLP18206 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
VCLP18206 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.43■□□□□ 0.54
VCLP18206 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
VCLP18206 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
VCLP18206 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCLP18206 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms