Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.98■□□□□ 0.31
UBL4AP11441 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.98■□□□□ 0.31
UBL4AP11441 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.98■□□□□ 0.31
UBL4AP11441 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.98■□□□□ 0.31
UBL4AP11441 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.98■□□□□ 0.31
UBL4AP11441 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBL4AP11441 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
UBL4AP11441 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBL4AP11441 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBL4AP11441 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.98■□□□□ 0.31
UBL4AP11441 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBL4AP11441 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBL4AP11441 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBL4AP11441 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBL4AP11441 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
UBL4AP11441 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.97■□□□□ 0.31
UBL4AP11441 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
UBL4AP11441 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 KRT8P7-201ENST00000533003 1432 ntBASIC16.97■□□□□ 0.31
UBL4AP11441 KRT8P50-201ENST00000562022 1438 ntBASIC16.97■□□□□ 0.31
UBL4AP11441 HOXB1-202ENST00000577092 1414 ntBASIC16.97■□□□□ 0.31
UBL4AP11441 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
UBL4AP11441 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.97■□□□□ 0.31
UBL4AP11441 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
UBL4AP11441 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
UBL4AP11441 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.97■□□□□ 0.31
UBL4AP11441 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.97■□□□□ 0.31
UBL4AP11441 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
UBL4AP11441 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.97■□□□□ 0.31
UBL4AP11441 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.97■□□□□ 0.31
UBL4AP11441 AC145285.6-201ENST00000604632 637 ntBASIC16.97■□□□□ 0.31
UBL4AP11441 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.97■□□□□ 0.31
UBL4AP11441 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
UBL4AP11441 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
UBL4AP11441 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.97■□□□□ 0.31
UBL4AP11441 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
UBL4AP11441 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBL4AP11441 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.97■□□□□ 0.31
UBL4AP11441 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.97■□□□□ 0.31
UBL4AP11441 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
UBL4AP11441 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.96■□□□□ 0.31
UBL4AP11441 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.96■□□□□ 0.31
UBL4AP11441 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.96■□□□□ 0.31
UBL4AP11441 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.96■□□□□ 0.31
UBL4AP11441 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
UBL4AP11441 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.96■□□□□ 0.31
UBL4AP11441 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
UBL4AP11441 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.96■□□□□ 0.31
UBL4AP11441 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.96■□□□□ 0.31
UBL4AP11441 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.96■□□□□ 0.31
UBL4AP11441 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.96■□□□□ 0.31
UBL4AP11441 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.96■□□□□ 0.31
UBL4AP11441 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.96■□□□□ 0.31
UBL4AP11441 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
UBL4AP11441 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
UBL4AP11441 AC073912.3-201ENST00000624414 853 ntBASIC16.96■□□□□ 0.31
UBL4AP11441 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.96■□□□□ 0.31
UBL4AP11441 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBL4AP11441 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
UBL4AP11441 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBL4AP11441 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBL4AP11441 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.96■□□□□ 0.3
UBL4AP11441 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.96■□□□□ 0.3
UBL4AP11441 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.96■□□□□ 0.3
UBL4AP11441 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBL4AP11441 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms