Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOC3P02656 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
APOC3P02656 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
APOC3P02656 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC3P02656 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.79□□□□□ -0.04
APOC3P02656 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC3P02656 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.79□□□□□ -0.04
APOC3P02656 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOC3P02656 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC3P02656 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC14.79□□□□□ -0.04
APOC3P02656 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
APOC3P02656 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC3P02656 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.79□□□□□ -0.04
APOC3P02656 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC3P02656 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC3P02656 PHGDH-210ENST00000641115 1638 ntBASIC14.79□□□□□ -0.04
APOC3P02656 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC3P02656 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.79□□□□□ -0.04
APOC3P02656 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC3P02656 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
APOC3P02656 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC3P02656 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC3P02656 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOC3P02656 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
APOC3P02656 AC007950.2-201ENST00000615045 2347 ntBASIC14.78□□□□□ -0.04
APOC3P02656 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
APOC3P02656 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC3P02656 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 AC026691.1-201ENST00000602502 2017 ntBASIC14.78□□□□□ -0.04
APOC3P02656 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC3P02656 DBET-201ENST00000630918 3363 ntBASIC14.78□□□□□ -0.04
APOC3P02656 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.78□□□□□ -0.04
APOC3P02656 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
APOC3P02656 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 HYI-213ENST00000583037 1322 ntTSL 5 BASIC14.78□□□□□ -0.04
APOC3P02656 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC3P02656 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC3P02656 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.78□□□□□ -0.04
APOC3P02656 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
APOC3P02656 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC14.78□□□□□ -0.04
APOC3P02656 EEF1DP3-203ENST00000566025 782 ntBASIC14.78□□□□□ -0.04
APOC3P02656 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.78□□□□□ -0.04
APOC3P02656 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.78□□□□□ -0.04
APOC3P02656 MIR3181-201ENST00000578512 73 ntBASIC14.78□□□□□ -0.04
APOC3P02656 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC3P02656 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.78□□□□□ -0.04
APOC3P02656 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC3P02656 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC3P02656 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC3P02656 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.78□□□□□ -0.04
APOC3P02656 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC3P02656 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.78□□□□□ -0.04
APOC3P02656 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.78□□□□□ -0.04
APOC3P02656 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.78□□□□□ -0.04
APOC3P02656 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
APOC3P02656 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOC3P02656 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.77□□□□□ -0.04
APOC3P02656 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
APOC3P02656 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC3P02656 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC3P02656 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC3P02656 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.77□□□□□ -0.04
APOC3P02656 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
APOC3P02656 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC3P02656 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.77□□□□□ -0.04
APOC3P02656 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC3P02656 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
APOC3P02656 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC3P02656 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.77□□□□□ -0.04
APOC3P02656 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC3P02656 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC3P02656 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC3P02656 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
APOC3P02656 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC3P02656 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC3P02656 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC3P02656 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC3P02656 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC3P02656 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms