Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.52■□□□□ 0.23
HLA-DQA2P01906 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HLA-DQA2P01906 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DQA2P01906 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DQA2P01906 KRT8P45-201ENST00000414328 1447 ntBASIC16.52■□□□□ 0.23
HLA-DQA2P01906 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DQA2P01906 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DQA2P01906 AC008556.1-201ENST00000610908 2040 ntBASIC16.52■□□□□ 0.23
HLA-DQA2P01906 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 AL162741.1-201ENST00000565563 1558 ntBASIC16.51■□□□□ 0.23
HLA-DQA2P01906 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 AP001412.1-201ENST00000608405 714 ntBASIC16.51■□□□□ 0.23
HLA-DQA2P01906 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DQA2P01906 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 NOC2LP1-202ENST00000452600 2235 ntBASIC16.5■□□□□ 0.23
HLA-DQA2P01906 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 PRORSD1P-201ENST00000295112 541 ntBASIC16.5■□□□□ 0.23
HLA-DQA2P01906 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 MFAP1P1-201ENST00000442257 1255 ntBASIC16.5■□□□□ 0.23
HLA-DQA2P01906 UBE2SP1-201ENST00000450587 669 ntBASIC16.5■□□□□ 0.23
HLA-DQA2P01906 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 MYLKP1-201ENST00000509077 1580 ntBASIC16.5■□□□□ 0.23
HLA-DQA2P01906 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA2P01906 AL109659.2-201ENST00000606809 1674 ntBASIC16.5■□□□□ 0.23
HLA-DQA2P01906 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 FZD10-202ENST00000539839 3282 ntBASIC16.49■□□□□ 0.23
HLA-DQA2P01906 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-DQA2P01906 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms