Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV12-3P01733 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV12-3P01733 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV12-3P01733 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV12-3P01733 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
TRBV12-3P01733 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV12-3P01733 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV12-3P01733 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV12-3P01733 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV12-3P01733 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV12-3P01733 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 HOMER2P1-201ENST00000455653 964 ntBASIC14.18□□□□□ -0.14
TRBV12-3P01733 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 MIR3180-4-201ENST00000582223 153 ntBASIC14.18□□□□□ -0.14
TRBV12-3P01733 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV12-3P01733 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV12-3P01733 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 ESPNP-201ENST00000270691 2015 ntBASIC14.17□□□□□ -0.14
TRBV12-3P01733 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 FAM8A6P-201ENST00000407496 1135 ntBASIC14.17□□□□□ -0.14
TRBV12-3P01733 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 AC112907.2-201ENST00000448639 330 ntBASIC14.17□□□□□ -0.14
TRBV12-3P01733 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 NTF6B-201ENST00000591913 560 ntBASIC14.17□□□□□ -0.14
TRBV12-3P01733 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV12-3P01733 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRBV12-3P01733 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms