Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF1O95521 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 NEFHP1-201ENST00000412845 2629 ntBASIC18.26■□□□□ 0.51
PRAMEF1O95521 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF1O95521 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF1O95521 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF1O95521 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF1O95521 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF1O95521 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF1O95521 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF1O95521 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF1O95521 AL359075.1-203ENST00000462729 1002 ntBASIC18.26■□□□□ 0.51
PRAMEF1O95521 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF1O95521 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF1O95521 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF1O95521 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.26■□□□□ 0.51
PRAMEF1O95521 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 GMCL1P1-201ENST00000463439 1581 ntBASIC18.25■□□□□ 0.51
PRAMEF1O95521 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF1O95521 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 ESPNP-201ENST00000270691 2015 ntBASIC18.25■□□□□ 0.51
PRAMEF1O95521 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF1O95521 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF1O95521 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF1O95521 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF1O95521 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF1O95521 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF1O95521 AC063952.2-201ENST00000498792 1227 ntBASIC18.25■□□□□ 0.51
PRAMEF1O95521 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 AC022616.7-201ENST00000525383 220 ntBASIC18.25■□□□□ 0.51
PRAMEF1O95521 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF1O95521 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF1O95521 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF1O95521 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF1O95521 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PRAMEF1O95521 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF1O95521 HCG11-201ENST00000411553 5696 ntBASIC18.25■□□□□ 0.51
PRAMEF1O95521 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 PVRIG2P-201ENST00000435460 978 ntBASIC18.24■□□□□ 0.51
PRAMEF1O95521 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PRAMEF1O95521 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF1O95521 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.23■□□□□ 0.51
PRAMEF1O95521 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF1O95521 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF1O95521 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF1O95521 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF1O95521 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF1O95521 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF1O95521 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms