Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH4O75427 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH4O75427 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
LRCH4O75427 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.11■□□□□ 0.65
LRCH4O75427 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH4O75427 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.11■□□□□ 0.65
LRCH4O75427 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
LRCH4O75427 AC141257.4-201ENST00000634557 245 ntBASIC19.11■□□□□ 0.65
LRCH4O75427 AC136944.6-201ENST00000634818 245 ntBASIC19.11■□□□□ 0.65
LRCH4O75427 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH4O75427 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
LRCH4O75427 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH4O75427 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH4O75427 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.11■□□□□ 0.65
LRCH4O75427 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH4O75427 AC138028.4-201ENST00000564984 1845 ntBASIC19.11■□□□□ 0.65
LRCH4O75427 AC068880.1-201ENST00000507289 2297 ntBASIC19.11■□□□□ 0.65
LRCH4O75427 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LRCH4O75427 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.1■□□□□ 0.65
LRCH4O75427 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.1■□□□□ 0.65
LRCH4O75427 AC010203.1-204ENST00000548782 407 ntBASIC19.1■□□□□ 0.65
LRCH4O75427 AC133561.5-201ENST00000635547 218 ntBASIC19.1■□□□□ 0.65
LRCH4O75427 AC097493.4-201ENST00000641197 219 ntBASIC19.1■□□□□ 0.65
LRCH4O75427 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LRCH4O75427 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH4O75427 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.1■□□□□ 0.65
LRCH4O75427 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.09■□□□□ 0.65
LRCH4O75427 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LRCH4O75427 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH4O75427 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.09■□□□□ 0.65
LRCH4O75427 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.09■□□□□ 0.65
LRCH4O75427 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.09■□□□□ 0.65
LRCH4O75427 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LRCH4O75427 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH4O75427 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH4O75427 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH4O75427 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH4O75427 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.09■□□□□ 0.65
LRCH4O75427 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.09■□□□□ 0.65
LRCH4O75427 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.09■□□□□ 0.65
LRCH4O75427 MIR3917-201ENST00000580971 93 ntBASIC19.09■□□□□ 0.65
LRCH4O75427 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH4O75427 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH4O75427 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.09■□□□□ 0.65
LRCH4O75427 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.09■□□□□ 0.65
LRCH4O75427 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH4O75427 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.09■□□□□ 0.65
LRCH4O75427 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH4O75427 AC008764.6-201ENST00000595909 2069 ntBASIC19.09■□□□□ 0.65
LRCH4O75427 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.08■□□□□ 0.65
LRCH4O75427 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
LRCH4O75427 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRCH4O75427 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.08■□□□□ 0.65
LRCH4O75427 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
LRCH4O75427 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRCH4O75427 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH4O75427 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.08■□□□□ 0.64
LRCH4O75427 AP000523.1-201ENST00000398242 1049 ntBASIC19.08■□□□□ 0.64
LRCH4O75427 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.08■□□□□ 0.64
LRCH4O75427 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.08■□□□□ 0.64
LRCH4O75427 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH4O75427 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LRCH4O75427 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
LRCH4O75427 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH4O75427 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH4O75427 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.08■□□□□ 0.64
LRCH4O75427 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH4O75427 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LRCH4O75427 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH4O75427 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH4O75427 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH4O75427 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH4O75427 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH4O75427 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH4O75427 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
LRCH4O75427 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH4O75427 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.07■□□□□ 0.64
LRCH4O75427 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH4O75427 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH4O75427 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LRCH4O75427 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LRCH4O75427 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.07■□□□□ 0.64
LRCH4O75427 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.07■□□□□ 0.64
LRCH4O75427 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.07■□□□□ 0.64
LRCH4O75427 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH4O75427 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH4O75427 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms