Protein–RNA interactions for Protein: O75154

RAB11FIP3, Rab11 family-interacting protein 3, humanhuman

Predictions only

Length 756 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3O75154 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 AL049597.2-201ENST00000565575 961 ntBASIC22.54■■□□□ 1.2
RAB11FIP3O75154 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAB11FIP3O75154 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.54■■□□□ 1.2
RAB11FIP3O75154 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 AC093010.1-201ENST00000473625 1624 ntBASIC22.53■■□□□ 1.2
RAB11FIP3O75154 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
RAB11FIP3O75154 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 LINC01311-201ENST00000565162 1445 ntBASIC22.52■■□□□ 1.2
RAB11FIP3O75154 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 MIR662-201ENST00000384847 95 ntBASIC22.52■■□□□ 1.2
RAB11FIP3O75154 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 AL096828.2-201ENST00000567259 1965 ntBASIC22.52■■□□□ 1.2
RAB11FIP3O75154 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAB11FIP3O75154 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.52■■□□□ 1.19
RAB11FIP3O75154 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
RAB11FIP3O75154 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 AL671277.2-201ENST00000458060 996 ntBASIC22.51■■□□□ 1.19
RAB11FIP3O75154 AC113404.2-201ENST00000507884 177 ntBASIC22.51■■□□□ 1.19
RAB11FIP3O75154 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAB11FIP3O75154 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms