Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCP110O43303 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCP110O43303 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCP110O43303 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
CCP110O43303 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCP110O43303 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.21■□□□□ 0.83
CCP110O43303 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.21■□□□□ 0.83
CCP110O43303 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.21■□□□□ 0.83
CCP110O43303 HLA-A-209ENST00000638375 975 ntBASIC20.21■□□□□ 0.83
CCP110O43303 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCP110O43303 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCP110O43303 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.21■□□□□ 0.83
CCP110O43303 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCP110O43303 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCP110O43303 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCP110O43303 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCP110O43303 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCP110O43303 RCC2P6-201ENST00000526625 1557 ntBASIC20.21■□□□□ 0.83
CCP110O43303 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCP110O43303 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CCP110O43303 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.2■□□□□ 0.82
CCP110O43303 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCP110O43303 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCP110O43303 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CCP110O43303 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.2■□□□□ 0.82
CCP110O43303 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCP110O43303 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.2■□□□□ 0.82
CCP110O43303 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCP110O43303 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCP110O43303 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.2■□□□□ 0.82
CCP110O43303 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCP110O43303 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCP110O43303 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCP110O43303 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCP110O43303 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCP110O43303 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCP110O43303 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCP110O43303 TSPY23P-201ENST00000440136 739 ntBASIC20.2■□□□□ 0.82
CCP110O43303 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCP110O43303 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCP110O43303 RPPH1-201ENST00000516869 333 ntBASIC20.2■□□□□ 0.82
CCP110O43303 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.2■□□□□ 0.82
CCP110O43303 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCP110O43303 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCP110O43303 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCP110O43303 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCP110O43303 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.19■□□□□ 0.82
CCP110O43303 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CCP110O43303 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CCP110O43303 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 KRT18P29-201ENST00000397031 1267 ntBASIC20.19■□□□□ 0.82
CCP110O43303 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.19■□□□□ 0.82
CCP110O43303 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.19■□□□□ 0.82
CCP110O43303 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.19■□□□□ 0.82
CCP110O43303 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CCP110O43303 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CCP110O43303 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCP110O43303 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.19■□□□□ 0.82
CCP110O43303 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCP110O43303 AL645608.8-201ENST00000606034 2086 ntBASIC20.18■□□□□ 0.82
CCP110O43303 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.18■□□□□ 0.82
CCP110O43303 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCP110O43303 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.18■□□□□ 0.82
CCP110O43303 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.18■□□□□ 0.82
CCP110O43303 PRORSD1P-201ENST00000295112 541 ntBASIC20.18■□□□□ 0.82
CCP110O43303 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCP110O43303 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.18■□□□□ 0.82
CCP110O43303 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.18■□□□□ 0.82
CCP110O43303 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCP110O43303 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.18■□□□□ 0.82
CCP110O43303 AC068587.9-201ENST00000641814 219 ntBASIC20.18■□□□□ 0.82
CCP110O43303 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCP110O43303 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCP110O43303 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCP110O43303 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms