Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
O00370 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
O00370 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
O00370 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
O00370 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
O00370 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.58■□□□□ 0.72
O00370 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
O00370 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.58■□□□□ 0.72
O00370 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
O00370 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
O00370 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.57■□□□□ 0.72
O00370 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.57■□□□□ 0.72
O00370 AL354751.1-201ENST00000412768 1863 ntBASIC19.57■□□□□ 0.72
O00370 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.57■□□□□ 0.72
O00370 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
O00370 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.57■□□□□ 0.72
O00370 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.57■□□□□ 0.72
O00370 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.57■□□□□ 0.72
O00370 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.57■□□□□ 0.72
O00370 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.57■□□□□ 0.72
O00370 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
O00370 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.57■□□□□ 0.72
O00370 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
O00370 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
O00370 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.56■□□□□ 0.72
O00370 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
O00370 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
O00370 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.56■□□□□ 0.72
O00370 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
O00370 RNF152P1-201ENST00000397754 604 ntBASIC19.56■□□□□ 0.72
O00370 AK4P3-201ENST00000418260 669 ntBASIC19.56■□□□□ 0.72
O00370 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.56■□□□□ 0.72
O00370 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.56■□□□□ 0.72
O00370 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
O00370 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.56■□□□□ 0.72
O00370 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.56■□□□□ 0.72
O00370 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.56■□□□□ 0.72
O00370 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.56■□□□□ 0.72
O00370 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.56■□□□□ 0.72
O00370 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.56■□□□□ 0.72
O00370 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 AC099343.3-201ENST00000605834 2503 ntBASIC19.56■□□□□ 0.72
O00370 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
O00370 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
O00370 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.55■□□□□ 0.72
O00370 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
O00370 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 MIR149-201ENST00000384879 89 ntBASIC19.55■□□□□ 0.72
O00370 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
O00370 TSPY5P-201ENST00000426936 936 ntBASIC19.55■□□□□ 0.72
O00370 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.55■□□□□ 0.72
O00370 SDHAP2-201ENST00000455183 2001 ntBASIC19.55■□□□□ 0.72
O00370 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.55■□□□□ 0.72
O00370 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.55■□□□□ 0.72
O00370 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.55■□□□□ 0.72
O00370 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
O00370 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.55■□□□□ 0.72
O00370 AL157888.1-201ENST00000631930 593 ntBASIC19.55■□□□□ 0.72
O00370 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.55■□□□□ 0.72
O00370 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.55■□□□□ 0.72
O00370 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms