Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
A0A1W2PRF3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
A0A1W2PRF3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
A0A1W2PRF3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
A0A1W2PRF3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
A0A1W2PRF3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
A0A1W2PRF3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
A0A1W2PRF3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
A0A1W2PRF3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
A0A1W2PRF3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
A0A1W2PRF3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
A0A1W2PRF3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
A0A1W2PRF3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
A0A1W2PRF3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
A0A1W2PRF3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
A0A1W2PRF3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
A0A1W2PRF3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
A0A1W2PRF3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
A0A1W2PRF3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
A0A1W2PRF3 STARP1-201ENST00000397973 869 ntBASIC15.1■□□□□ 0.01
A0A1W2PRF3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.1■□□□□ 0.01
A0A1W2PRF3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
A0A1W2PRF3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.1■□□□□ 0.01
A0A1W2PRF3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.1■□□□□ 0.01
A0A1W2PRF3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.1■□□□□ 0.01
A0A1W2PRF3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
A0A1W2PRF3 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.1■□□□□ 0.01
A0A1W2PRF3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
A0A1W2PRF3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
A0A1W2PRF3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
A0A1W2PRF3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
A0A1W2PRF3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.1■□□□□ 0.01
A0A1W2PRF3 AC005082.1-201ENST00000413042 2259 ntBASIC15.1■□□□□ 0.01
A0A1W2PRF3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
A0A1W2PRF3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
A0A1W2PRF3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.1■□□□□ 0.01
A0A1W2PRF3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 VENTXP5-201ENST00000523979 775 ntBASIC15.09■□□□□ 0.01
A0A1W2PRF3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 AC010240.3-201ENST00000607688 395 ntBASIC15.09■□□□□ 0.01
A0A1W2PRF3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 MYC-208ENST00000641036 567 ntBASIC15.09■□□□□ 0.01
A0A1W2PRF3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
A0A1W2PRF3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.09■□□□□ 0.01
A0A1W2PRF3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
A0A1W2PRF3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
A0A1W2PRF3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
A0A1W2PRF3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
A0A1W2PRF3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
A0A1W2PRF3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
A0A1W2PRF3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
A0A1W2PRF3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
A0A1W2PRF3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.08■□□□□ 0.01
A0A1W2PRF3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
A0A1W2PRF3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
A0A1W2PRF3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
A0A1W2PRF3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
A0A1W2PRF3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
A0A1W2PRF3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
A0A1W2PRF3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms