Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 MIR3180-5-201ENST00000583743 153 ntBASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 Z99916.2-201ENST00000604037 246 ntBASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV27A0A087WT01 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV27A0A087WT01 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.64■□□□□ 0.26
TRAV27A0A087WT01 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV27A0A087WT01 GMCL1P1-201ENST00000463439 1581 ntBASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 AL096828.2-201ENST00000567259 1965 ntBASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 AP003071.4-201ENST00000562276 1284 ntBASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV27A0A087WT01 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms