Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 LINC01238-205ENST00000567549 1107 ntBASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 AC011558.1-201ENST00000623459 338 ntBASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 TSPY5P-201ENST00000426936 936 ntBASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 AC092647.4-201ENST00000457211 535 ntBASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 DUX4L26-201ENST00000489078 1255 ntBASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 AC024243.1-201ENST00000609234 778 ntBASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 HOXB1-202ENST00000577092 1414 ntBASIC17.38■□□□□ 0.37
CLCA3PQ9Y6N3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCA3PQ9Y6N3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 GCSHP2-201ENST00000560971 527 ntBASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 AL441883.1-201ENST00000566170 1045 ntBASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA3PQ9Y6N3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms