Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 AL499627.1-201ENST00000569373 2188 ntBASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC27.67■■■□□ 2.02
CDC42BPBQ9Y5S2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 AL356309.3-201ENST00000624132 1934 ntBASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 MYLKP1-201ENST00000509077 1580 ntBASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 AC093484.2-201ENST00000580996 2166 ntBASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 AP002414.3-201ENST00000589352 1468 ntBASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 MIR940-201ENST00000401276 94 ntBASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 MTDHP4-201ENST00000600287 670 ntBASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
CDC42BPBQ9Y5S2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 AC007967.2-201ENST00000432613 625 ntBASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
CDC42BPBQ9Y5S2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CDC42BPBQ9Y5S2 CLDN5-201ENST00000403084 2357 ntBASIC27.64■■■□□ 2.02
CDC42BPBQ9Y5S2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
CDC42BPBQ9Y5S2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC27.64■■■□□ 2.02
CDC42BPBQ9Y5S2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC27.64■■■□□ 2.02
CDC42BPBQ9Y5S2 PMS2P2-201ENST00000425039 1128 ntBASIC27.64■■■□□ 2.02
CDC42BPBQ9Y5S2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC27.64■■■□□ 2.02
CDC42BPBQ9Y5S2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
CDC42BPBQ9Y5S2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CDC42BPBQ9Y5S2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
CDC42BPBQ9Y5S2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
CDC42BPBQ9Y5S2 KRT18P65-201ENST00000439811 1286 ntBASIC27.64■■■□□ 2.01
CDC42BPBQ9Y5S2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC27.64■■■□□ 2.01
CDC42BPBQ9Y5S2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC27.64■■■□□ 2.01
CDC42BPBQ9Y5S2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC27.64■■■□□ 2.01
CDC42BPBQ9Y5S2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC27.64■■■□□ 2.01
CDC42BPBQ9Y5S2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC27.64■■■□□ 2.01
CDC42BPBQ9Y5S2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CDC42BPBQ9Y5S2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC27.63■■■□□ 2.01
CDC42BPBQ9Y5S2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC27.63■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms