Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB1Q9Y5G3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 AC091874.3-201ENST00000512672 1195 ntBASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 AL160286.2-201ENST00000567150 934 ntBASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 AL118508.1-201ENST00000613502 2345 ntBASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB1Q9Y5G3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.83■□□□□ 0.29
PCDHGB1Q9Y5G3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGB1Q9Y5G3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGB1Q9Y5G3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGB1Q9Y5G3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 AL121761.2-201ENST00000598007 1648 ntBASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 AC008556.1-201ENST00000610908 2040 ntBASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 AC011676.5-201ENST00000624864 2660 ntBASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 AC068587.9-201ENST00000641814 219 ntBASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB1Q9Y5G3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 RCC2P6-201ENST00000526625 1557 ntBASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 KRT8P45-201ENST00000414328 1447 ntBASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms