Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 Z83836.1-201ENST00000624605 1642 ntBASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 AL158211.5-201ENST00000623583 2518 ntBASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 FP475955.4-201ENST00000623131 1990 ntBASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 TSPY19P-201ENST00000418461 509 ntBASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 AL845331.1-201ENST00000424978 1190 ntBASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 TSPY18P-201ENST00000441642 509 ntBASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 KRT17P6-201ENST00000453795 1220 ntBASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 AP000867.3-201ENST00000524675 377 ntBASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 IGHV3-41-201ENST00000613121 348 ntBASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SSX2IPQ9Y2D8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 AC006333.2-201ENST00000607957 2099 ntBASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 AC091304.2-201ENST00000564639 760 ntBASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 IRX1P1-201ENST00000438849 1838 ntBASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.73■□□□□ 0.75
SSX2IPQ9Y2D8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms