Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.98■□□□□ 0.47
SATB2Q9UPW6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.97■□□□□ 0.47
SATB2Q9UPW6 FAAHP1-202ENST00000446499 1238 ntBASIC17.97■□□□□ 0.47
SATB2Q9UPW6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SATB2Q9UPW6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 PVRIG2P-201ENST00000435460 978 ntBASIC17.96■□□□□ 0.47
SATB2Q9UPW6 MCCD1P1-208ENST00000445732 328 ntBASIC17.96■□□□□ 0.47
SATB2Q9UPW6 KRT17P6-201ENST00000453795 1220 ntBASIC17.96■□□□□ 0.47
SATB2Q9UPW6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.96■□□□□ 0.47
SATB2Q9UPW6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SATB2Q9UPW6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SATB2Q9UPW6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SATB2Q9UPW6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SATB2Q9UPW6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
SATB2Q9UPW6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.96■□□□□ 0.46
SATB2Q9UPW6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
SATB2Q9UPW6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 CHCHD2P8-201ENST00000429873 447 ntBASIC17.95■□□□□ 0.46
SATB2Q9UPW6 AP000347.1-202ENST00000435868 847 ntBASIC17.95■□□□□ 0.46
SATB2Q9UPW6 NUS1P1-201ENST00000446295 882 ntBASIC17.95■□□□□ 0.46
SATB2Q9UPW6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 MIR3180-5-201ENST00000583743 153 ntBASIC17.95■□□□□ 0.46
SATB2Q9UPW6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 IFNL4P1-201ENST00000607083 540 ntBASIC17.95■□□□□ 0.46
SATB2Q9UPW6 AC079602.3-201ENST00000623931 403 ntBASIC17.95■□□□□ 0.46
SATB2Q9UPW6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 AC093525.10-201ENST00000625130 1569 ntBASIC17.95■□□□□ 0.46
SATB2Q9UPW6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SATB2Q9UPW6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms