Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TREM2Q9NZC2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TREM2Q9NZC2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TREM2Q9NZC2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TREM2Q9NZC2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TREM2Q9NZC2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TREM2Q9NZC2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TREM2Q9NZC2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
TREM2Q9NZC2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TREM2Q9NZC2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TREM2Q9NZC2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TREM2Q9NZC2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.89■□□□□ 0.13
TREM2Q9NZC2 PCDHB18P-201ENST00000524813 2368 ntBASIC15.89■□□□□ 0.13
TREM2Q9NZC2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 TSPY5P-201ENST00000426936 936 ntBASIC15.88■□□□□ 0.13
TREM2Q9NZC2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 CR769767.2-201ENST00000622735 460 ntBASIC15.88■□□□□ 0.13
TREM2Q9NZC2 AC011558.1-201ENST00000623459 338 ntBASIC15.88■□□□□ 0.13
TREM2Q9NZC2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 AC008556.1-201ENST00000610908 2040 ntBASIC15.88■□□□□ 0.13
TREM2Q9NZC2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TREM2Q9NZC2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.87■□□□□ 0.13
TREM2Q9NZC2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 MCCD1P1-208ENST00000445732 328 ntBASIC15.87■□□□□ 0.13
TREM2Q9NZC2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 AC090164.3-201ENST00000610780 2143 ntBASIC15.87■□□□□ 0.13
TREM2Q9NZC2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 WIZP1-201ENST00000531444 2299 ntBASIC15.87■□□□□ 0.13
TREM2Q9NZC2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TREM2Q9NZC2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TREM2Q9NZC2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms