Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 MIPEPP3-201ENST00000412105 444 ntBASIC16.71■□□□□ 0.27
HMG20AQ9NP66 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 AC083906.2-201ENST00000511578 360 ntBASIC16.71■□□□□ 0.27
HMG20AQ9NP66 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 AL513477.1-201ENST00000602865 2407 ntBASIC16.71■□□□□ 0.27
HMG20AQ9NP66 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.71■□□□□ 0.27
HMG20AQ9NP66 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
HMG20AQ9NP66 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HMG20AQ9NP66 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HMG20AQ9NP66 MST1L-201ENST00000442552 2185 ntBASIC16.7■□□□□ 0.26
HMG20AQ9NP66 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.69■□□□□ 0.26
HMG20AQ9NP66 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms